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Combining Pandas Data Frames using Merge on a Common Column
Home Backend Development Python Tutorial How to Resolve Column Overlap Errors While Combining Pandas Data Frames with `join()`?

How to Resolve Column Overlap Errors While Combining Pandas Data Frames with `join()`?

Oct 27, 2024 am 06:07 AM

How to Resolve Column Overlap Errors While Combining Pandas Data Frames with `join()`?

Combining Pandas Data Frames using Merge on a Common Column

When working with data analysis tasks, it is often necessary to combine data from multiple sources into a single data frame. Pandas provides several methods for performing data frame joins, one of which is merge() that enables us to combine data frames based on common columns.

Suppose we have two data frames:

restaurant_ids_dataframe:

Column Name Data Type
business_id int
categories object
city object
full_address object
latitude float
longitude float
name object
neighborhoods object
open bool
review_count int
stars float
state object
type object

restaurant_review_frame:

Column Name Data Type
business_id int
date object
review_id int
stars float
text object
type object
user_id int
votes int

The goal is to combine these data frames into a single data frame using the DataFrame.join() method. We would typically expect the join to be performed on the common column business_id. However, when attempting the following line of code:

restaurant_review_frame.join(other=restaurant_ids_dataframe, on='business_id', how='left')
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we receive an error:

Exception: columns overlap: Index([business_id, stars, type], dtype=object)
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To resolve this issue, we should utilize the merge() method instead, specifying the common column in the on parameter. The merge() method is designed to handle overlapping columns and combine the data frames accordingly. The syntax would be:

<code class="python">import pandas as pd
pd.merge(restaurant_ids_dataframe, restaurant_review_frame, on='business_id', how='outer')</code>
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Here, the how parameter defines the type of join to be performed. In this case, we have used outer, which performs a full outer join, combining all rows from both data frames.

Additionally, we can specify the suffixes for the merged columns using the suffixes parameter, allowing us to customize the column names in the resulting data frame. For example, to suffix the columns as star_restaurant_id and star_restaurant_review, we can use:

<code class="python">pd.merge(restaurant_ids_dataframe, restaurant_review_frame, on='business_id', how='outer', suffixes=('_restaurant_id', '_restaurant_review'))</code>
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The merge() method offers a comprehensive set of parameters that provide fine-grained control over the join operation, enabling efficient and accurate data frame combinations.

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