Sending and Receiving 2D Array Over MPI
Introduction:
To optimize the computational efficiency of a C serial code involving a large 2D matrix, distributed computing with MPI is often employed. This approach involves splitting the matrix among multiple nodes, performing local operations, and exchanging data at specific boundaries.
Approach and Concerns:
The proposed approach involves dividing the 2D matrix into segments, with each node handling a portion. At the end of each timestep, edge values are exchanged between neighboring nodes to ensure continuity across boundaries. The implementation plan outlines two processors, with one handling rows 0 to x and the other handling x 1 to xx of the matrix.
Proposed Implementation and Questions:
The implementation employs a combination of MPI_SEND and MPI_RECEIVE functions to exchange edge values between the processors. However, the question arises as to whether this approach is optimal and if any additional MPI functions should be considered.
Response and Recommendations:
To improve the implementation, it is recommended to allocate contiguous arrays for more efficient handling in MPI. This can be achieved using memory allocation functions like alloc_2d_init. Additionally, replacing MPI_SEND and MPI_RECEIVE with collective communication patterns using MPI_Sendrecv or non-blocking communication can enhance performance.
Example:
The following revised code snippet provides an example of improved communication using MPI_Sendrecv:
int sendptr, recvptr; int neigh = MPI_PROC_NULL; if (myrank == 0) { sendptr = addr(A[0][0]); recvptr = addr(B[0][0]); neigh = 1; } else { sendptr = addr(B[0][0]); recvptr = addr(A[0][0]); neigh = 0; } MPI_Sendrecv(sendptr, N*M, MPI_INT, neigh, tagA, recvptr, N*M, MPI_INT, neigh, tagB, MPI_COMM_WORLD, &status);
Optimizations:
Using MPI_Sendrecv allows for simultaneous sending and receiving of data, eliminating the need for barriers. This optimized approach improves communication efficiency and reduces bottlenecks.
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